Cell Signaling model

Q&A Modeling Q&A
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Hello,
Help please. I would like to find a model that is based on cell signaling or automata. My research is in mTOR Pathway.
Thanks

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Is this paper relevant? Agent-Based Modeling of the Immune System: NetLogo, a Promising Framework - PMC

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Hello…,
For modeling the mTOR pathway, you might consider using models based on cellular automata or agent-based modeling, which are useful for capturing the complex signaling dynamics. You could also explore specific pathway-focused simulation tools like CellDesigner or COPASI that allow for detailed pathway modeling, including mTOR signaling.

I hope this will help you…

Respected community member! :smiling_face_with_three_hearts:

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There are many models in the NetLogo Models Library that use cellular automata. You can open the library via File->Models Library or CTRL-m (Linux, Windows) CMD-m (MacOS). Then do a search by typing “automat” in the search library at the bottom right of the dialog.